Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 RNU4-73P-201ENST00000363164 141 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 Y_RNA.356-201ENST00000365475 113 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 EEF1GP6-201ENST00000402309 905 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 RNA5SP231-201ENST00000410496 138 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 RPL12P27-201ENST00000414870 496 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC092647.1-201ENST00000420654 287 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 USP9YP9-201ENST00000429406 715 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 OSTCP2-201ENST00000437956 444 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 TCEAL4P1-201ENST00000453620 588 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 SNRPFP4-201ENST00000456366 242 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 RPS18P13-201ENST00000461260 454 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 RPL30P9-201ENST00000465586 330 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 RN7SL549P-201ENST00000478997 282 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC009269.1-202ENST00000484381 469 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXA2O43364 IMPA1P1-201ENST00000510718 842 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 Y_RNA.675-201ENST00000516389 149 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 AP001994.1-201ENST00000527539 826 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC018523.1-201ENST00000534211 512 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC125611.2-201ENST00000551907 647 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC105275.2-201ENST00000567907 711 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC090415.1-201ENST00000581877 847 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 MIR5010-201ENST00000582846 120 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC090774.2-201ENST00000584708 322 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 KC877982.1-201ENST00000602313 470 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 BNIP3P11-201ENST00000603878 563 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC004890.3-201ENST00000605566 1095 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 AL020991.1-201ENST00000612314 373 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AL139089.1-201ENST00000620372 975 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 AC087893.2-201ENST00000623272 255 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 AL022578.1-201ENST00000439330 1433 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXA2O43364 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXA2O43364 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 MXI1-204ENST00000369612 879 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
HOXA2O43364 Y_RNA.460-201ENST00000384255 102 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 SNORA7B-201ENST00000384360 139 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 SNORD65.1-201ENST00000390889 71 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 RNA5SP185-201ENST00000390963 114 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXA2O43364 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 AIMP1P1-201ENST00000418670 937 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 SDCBPP3-201ENST00000419629 891 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 PTP4A1P1-201ENST00000420539 515 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXA2O43364 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.53□□□□□ -1.04
HOXA2O43364 VN1R20P-201ENST00000425215 966 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 Z68868.1-201ENST00000429048 544 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 AC104850.1-201ENST00000435940 476 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 AC092421.1-201ENST00000448148 418 ntBASIC8.53□□□□□ -1.04
HOXA2O43364 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXA2O43364 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXA2O43364 AF305872.1-201ENST00000485217 471 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms