Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
TRIM38O00635 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM38O00635 AP003486.1-201ENST00000525716 3994 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 RN7SKP237-201ENST00000364663 301 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 RN7SKP15-201ENST00000364742 309 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 SNORA27.3-201ENST00000364937 134 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 RN7SKP269-201ENST00000365545 319 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM38O00635 AL356968.2-201ENST00000412769 1257 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 CBX1P3-201ENST00000413296 527 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 AL360013.1-201ENST00000419031 858 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 VN1R20P-201ENST00000425215 966 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM38O00635 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM38O00635 CRYGGP-201ENST00000443337 145 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 POU5F1P5-201ENST00000445059 658 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC016724.1-201ENST00000453215 421 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 RN7SL39P-201ENST00000462264 297 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AK4P6-201ENST00000505168 528 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC135983.3-201ENST00000528049 1226 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM38O00635 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM38O00635 MTND4LP25-201ENST00000570218 163 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM38O00635 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC040174.2-201ENST00000602701 465 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 RPAP2P1-201ENST00000603626 1168 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM38O00635 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AL354718.1-201ENST00000619764 589 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 MIR7854-201ENST00000620068 65 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 AC018659.2-201ENST00000624690 715 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM38O00635 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AC073365.1-203ENST00000641055 1992 ntBASIC6.53□□□□□ -1.36
TRIM38O00635 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM38O00635 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM38O00635 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM38O00635 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM38O00635 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM38O00635 AC034229.2-201ENST00000566945 2508 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 IFIT1P1-201ENST00000400497 1449 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 CCAT2-201ENST00000630920 1752 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM38O00635 FAM32BP-201ENST00000344033 333 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 YWHAZP4-201ENST00000392459 708 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 KCTD9P1-201ENST00000430462 1167 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 SULT1D1P-201ENST00000458020 882 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC105918.1-201ENST00000474399 838 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM38O00635 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 RN7SL362P-201ENST00000494228 267 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC091874.2-201ENST00000505889 720 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 HSD3BP3-201ENST00000514706 994 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms