Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC069542.2-201ENST00000624816 216 ntBASIC7.61□□□□□ -1.19
SOX1O00570 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 RN7SKP23-201ENST00000625159 4301 ntBASIC7.61□□□□□ -1.19
SOX1O00570 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SOX1O00570 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 AL022163.1-201ENST00000430261 1569 ntBASIC7.6□□□□□ -1.19
SOX1O00570 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 Y_RNA.3-201ENST00000362331 103 ntBASIC7.6□□□□□ -1.19
SOX1O00570 SNORD56.4-201ENST00000363883 71 ntBASIC7.6□□□□□ -1.19
SOX1O00570 RNU6-553P-201ENST00000364047 96 ntBASIC7.6□□□□□ -1.19
SOX1O00570 RNA5SP510-201ENST00000364697 99 ntBASIC7.6□□□□□ -1.19
SOX1O00570 U6.112-201ENST00000384129 70 ntBASIC7.6□□□□□ -1.19
SOX1O00570 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 AL121835.1-201ENST00000404250 354 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AL096711.1-201ENST00000404780 554 ntBASIC7.6□□□□□ -1.19
SOX1O00570 HMGN1P20-201ENST00000411849 300 ntBASIC7.6□□□□□ -1.19
SOX1O00570 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 FGF7P5-201ENST00000441829 291 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 MRPL35P2-201ENST00000448009 511 ntBASIC7.6□□□□□ -1.19
SOX1O00570 NECAP1P2-201ENST00000455668 727 ntBASIC7.6□□□□□ -1.19
SOX1O00570 RPSAP7-201ENST00000456871 885 ntBASIC7.6□□□□□ -1.19
SOX1O00570 RPS26P39-201ENST00000469206 341 ntBASIC7.6□□□□□ -1.19
SOX1O00570 RN7SL413P-201ENST00000482700 297 ntBASIC7.6□□□□□ -1.19
SOX1O00570 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 RPS27AP16-201ENST00000492222 470 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 AC112184.1-201ENST00000505179 312 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC010424.1-201ENST00000506336 297 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX1O00570 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX1O00570 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 AC021483.2-201ENST00000567415 758 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX1O00570 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 AC022662.1-201ENST00000580252 331 ntBASIC7.6□□□□□ -1.19
SOX1O00570 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 AC106791.2-201ENST00000604680 391 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AL158063.1-201ENST00000615349 536 ntBASIC7.6□□□□□ -1.19
SOX1O00570 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 RMST_10.1-201ENST00000616309 154 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 AC006058.1-201ENST00000568686 5067 ntBASIC7.6□□□□□ -1.19
SOX1O00570 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.6□□□□□ -1.19
SOX1O00570 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX1O00570 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SOX1O00570 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 AL133268.1-201ENST00000405676 1401 ntBASIC7.6□□□□□ -1.19
SOX1O00570 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX1O00570 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX1O00570 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms