Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC093297.3-201ENST00000607056 2517 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 NACAP7-201ENST00000407371 609 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 SNORA81-201ENST00000408493 178 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 RPSAP65-201ENST00000429660 595 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC144530.1-201ENST00000452862 555 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 RN7SL369P-201ENST00000477138 299 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 RN7SL714P-201ENST00000487050 298 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 RN7SL104P-201ENST00000498686 293 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC112184.1-201ENST00000505179 312 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 EIF4EP5-201ENST00000528228 640 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 MRPS21P8-201ENST00000569196 235 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC090616.1-201ENST00000583895 447 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AL138895.2-201ENST00000603019 178 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC091193.1-201ENST00000604640 448 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AC092681.3-201ENST00000609463 678 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 AL136097.3-201ENST00000611097 505 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA2E9PIF3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC007159.1-201ENST00000566529 4706 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC112492.2-201ENST00000432774 1030 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 RPL12P24-201ENST00000474907 486 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC095052.1-201ENST00000509955 863 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC026782.2-201ENST00000510845 636 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA2E9PIF3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC027575.3-201ENST00000583058 2747 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AL157831.2-201ENST00000564681 3095 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC119674.1-213ENST00000641177 1386 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms