Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Z99129.1-201ENST00000612510 255 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC016999.2-201ENST00000614692 556 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC008083.4-201ENST00000615076 444 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL359314.1-201ENST00000616913 261 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CU638689.2-201ENST00000623809 818 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC087821.2-201ENST00000637086 450 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SAMMSON-209ENST00000641222 1100 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SAMMSON-214ENST00000641395 1264 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC117409.1-201ENST00000470499 1310 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 ZNF840P-201ENST00000504759 1996 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC008957.3-201ENST00000624112 2242 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC138393.1-206ENST00000540997 1886 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 RNU6-500P-201ENST00000362349 107 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 Y_RNA.248-201ENST00000364501 109 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 MIR142-201ENST00000384835 87 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 YWHAZP4-201ENST00000392459 708 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 SUMO2P13-201ENST00000403109 272 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC066692.1-201ENST00000421721 457 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 RPL7P7-201ENST00000428803 703 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 OR51R1P-201ENST00000435309 952 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 YWHAZP2-201ENST00000440317 728 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC239860.1-201ENST00000444680 1270 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC010240.2-201ENST00000445363 1205 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AL590004.3-202ENST00000445883 451 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 ZNF114P1-201ENST00000453500 292 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 PSAT1P4-201ENST00000466500 526 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 RN7SL791P-201ENST00000467868 295 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC026254.2-201ENST00000475295 371 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC087385.2-201ENST00000477729 498 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 RN7SL335P-201ENST00000482790 304 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC066616.1-201ENST00000486795 413 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC079768.1-201ENST00000503181 711 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC146944.3-201ENST00000509969 371 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 SERPINE4P-201ENST00000554978 281 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC012435.1-202ENST00000568772 240 ntBASIC6.48□□□□□ -1.37
SHISA3A0PJX4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC6.48□□□□□ -1.37
SHISA3A0PJX4 AP002884.5-201ENST00000595053 1132 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms