Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AF287957.1-201ENST00000607368 1595 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 UVSSA-201ENST00000324803 4441 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ADCY10P1-202ENST00000457653 3785 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 RNU1-47P-201ENST00000362966 163 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 Y_RNA.339-201ENST00000365325 102 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL589647.1-201ENST00000402485 466 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC127391.1-201ENST00000411737 98 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 PTPN2P1-201ENST00000423212 1072 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 Z83313.1-201ENST00000433780 718 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 RPS4XP10-201ENST00000465034 731 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 DAZAP2P1-201ENST00000475212 503 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MTCYBP40-201ENST00000509390 1135 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 Vault.3-201ENST00000516676 95 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC022868.1-201ENST00000517767 391 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AP002469.1-201ENST00000526011 1043 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 OR5B10P-201ENST00000532869 642 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 NBPF5P-202ENST00000545941 1032 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 CYCSP2-201ENST00000558168 301 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC010547.7-201ENST00000570323 333 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MIR4269-201ENST00000578705 84 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC110743.1-201ENST00000584870 478 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL359704.2-201ENST00000604335 521 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL133173.2-201ENST00000614270 90 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 PDE4DIPP1-201ENST00000420737 1641 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AL121832.3-201ENST00000616512 3700 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 AC100827.4-201ENST00000563464 2441 ntBASIC8.49□□□□□ -1.05
LHX6Q9UPM6 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LHX6Q9UPM6 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 PDCL-201ENST00000259467 2813 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 Y_RNA.100-201ENST00000363141 102 ntBASIC8.48□□□□□ -1.05
LHX6Q9UPM6 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LHX6Q9UPM6 RPL7P25-201ENST00000404151 721 ntBASIC8.48□□□□□ -1.05
LHX6Q9UPM6 OSTCP6-201ENST00000407493 457 ntBASIC8.48□□□□□ -1.05
LHX6Q9UPM6 RIMKLBP1-201ENST00000408914 1164 ntBASIC8.48□□□□□ -1.05
LHX6Q9UPM6 RNU6-370P-201ENST00000411008 104 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms