Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC068733.2-201ENST00000605434 1418 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 RNFT1P3-201ENST00000340898 1052 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 RNA5SP273-201ENST00000362484 113 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 RNA5SP477-201ENST00000362639 119 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 RNU6-386P-201ENST00000362650 107 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 RN7SKP269-201ENST00000365545 319 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL132875.1-201ENST00000403623 949 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 IPPKP1-201ENST00000422501 768 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 CDY8P-201ENST00000428380 1279 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 CDY20P-201ENST00000447528 1279 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC026254.2-201ENST00000475295 371 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 OR5H7P-201ENST00000514084 930 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 SNORA26.10-201ENST00000516427 141 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 IGKV2-4-201ENST00000523070 340 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC068305.2-201ENST00000550567 1205 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AP005119.1-201ENST00000580956 292 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL513218.1-201ENST00000606527 391 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC092953.2-201ENST00000608000 699 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC008833.1-201ENST00000611633 691 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 WBP1LP8-201ENST00000617401 327 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AP003789.1-201ENST00000617737 605 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 SNX18P12-201ENST00000624821 759 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL359195.2-201ENST00000623657 4412 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC092725.2-201ENST00000567658 1389 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL354890.1-201ENST00000413730 346 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 NPM1P36-201ENST00000415681 835 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 RN7SKP5-201ENST00000517045 272 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC008555.7-201ENST00000605008 583 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC015802.5-201ENST00000607478 399 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AL117339.4-201ENST00000608335 7063 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC022819.1-201ENST00000563495 3910 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 PARP4P1-201ENST00000435945 2337 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 AC024651.2-201ENST00000562480 2098 ntBASIC7.04□□□□□ -1.28
COL20A1Q9P218 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms