Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC068769.1-201ENST00000474767 2426 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 NMD3P2-201ENST00000421815 761 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AMYP1-201ENST00000440059 1023 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL162739.1-201ENST00000450606 307 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 SDC4P-201ENST00000453285 601 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC098847.1-201ENST00000473094 348 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 LDHAP1-201ENST00000509421 992 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AP001804.1-201ENST00000526868 919 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL136097.3-201ENST00000611097 505 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 uc_338.26-201ENST00000612659 160 ntBASIC6.43□□□□□ -1.38
CISHQ9NSE2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AL096711.1-201ENST00000404780 554 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 RPL24P2-201ENST00000421023 475 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 ATP5LP2-201ENST00000440646 311 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AL445466.1-201ENST00000448432 357 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 PPIAP27-201ENST00000453800 265 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 ACA64.4-201ENST00000459070 127 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC068228.1-201ENST00000461723 211 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC023194.2-201ENST00000465398 406 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 RN7SKP238-201ENST00000516483 249 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC110056.1-201ENST00000525759 911 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC008507.3-201ENST00000585753 472 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC096708.4-201ENST00000620563 552 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 GNL2P1-201ENST00000451274 2190 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 AC114876.1-201ENST00000490962 1366 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 RBPJP7-201ENST00000442803 1447 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 RBPJP5-201ENST00000449433 1447 ntBASIC6.42□□□□□ -1.38
CISHQ9NSE2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.42□□□□□ -1.38
CISHQ9NSE2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 LYARP1-201ENST00000436977 1501 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SNRPEP6-201ENST00000407465 277 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 MYL6P5-201ENST00000412707 459 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 RPL35AP3-201ENST00000414680 288 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms