Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 CDY10P-201ENST00000452415 1567 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC005702.3-201ENST00000585345 1447 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 RNU1-24P-201ENST00000364285 165 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 RNA5SP485-201ENST00000365053 119 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TAS2R15P-201ENST00000390674 928 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 RN7SKP129-201ENST00000410288 299 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL031779.1-201ENST00000415663 330 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 MTND2P18-201ENST00000419962 1030 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 VN1R21P-201ENST00000426703 765 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC003989.1-201ENST00000434569 565 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC108751.3-201ENST00000461814 1020 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC026254.2-201ENST00000475295 371 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC098818.1-201ENST00000478593 252 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 H3F3AP3-201ENST00000497682 407 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC093763.2-201ENST00000505334 1223 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC023968.1-201ENST00000560719 475 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC234775.3-201ENST00000564612 656 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 SETP3-201ENST00000581726 813 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC015818.6-201ENST00000584274 634 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC011500.1-201ENST00000601963 469 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC023762.1-201ENST00000603280 584 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC090425.2-201ENST00000608818 501 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 MIR8084-201ENST00000614105 89 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC092140.2-201ENST00000618027 521 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC089999.3-201ENST00000622440 577 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC073342.3-201ENST00000624211 193 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC126544.2-201ENST00000625174 749 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 CLCA3P-203ENST00000490028 2781 ntBASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP1Q96SZ6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms