Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
IFT140Q96RY7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
IFT140Q96RY7 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
IFT140Q96RY7 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
IFT140Q96RY7 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL357752.1-201ENST00000412817 349 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL606490.8-201ENST00000441624 319 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 LDHBP2-201ENST00000456969 1005 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 AC007686.1-201ENST00000488511 463 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL671862.1-201ENST00000515851 349 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AC073916.1-201ENST00000545095 130 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AL445528.2-201ENST00000620582 470 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 FO393409.1-201ENST00000399325 1372 ntBASIC9.81□□□□□ -0.84
IFT140Q96RY7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
IFT140Q96RY7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
IFT140Q96RY7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 AC005294.1-201ENST00000355509 281 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 GAPDHP42-201ENST00000406848 981 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 OR5W1P-201ENST00000423705 938 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 RPS27AP3-201ENST00000453803 454 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 RPL7P6-201ENST00000480903 738 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 SCARNA6.1-201ENST00000516989 238 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
IFT140Q96RY7 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 AC022893.2-201ENST00000564832 3296 ntBASIC9.8□□□□□ -0.84
IFT140Q96RY7 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
IFT140Q96RY7 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 RPL23P2-201ENST00000320371 421 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 RNA5SP319-201ENST00000362768 119 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 CEACAMP7-201ENST00000444105 496 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC009220.1-201ENST00000451614 275 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC110775.1-201ENST00000513721 462 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AP001922.4-201ENST00000526967 290 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 MIR4697-201ENST00000582977 78 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC008937.3-201ENST00000606813 1700 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
IFT140Q96RY7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AL159987.1-201ENST00000347911 293 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 CYCSP6-201ENST00000434498 302 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC019185.1-201ENST00000442718 389 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC073594.1-201ENST00000462065 364 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 RPL32P33-201ENST00000487023 394 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC090638.1-201ENST00000498296 909 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 MIR4330-201ENST00000579077 105 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 MIR4260-201ENST00000583107 67 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 MIR378J-201ENST00000611988 109 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms