Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MTND2P20-201ENST00000440805 661 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RPSAP40-201ENST00000442343 891 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC245291.3-201ENST00000443400 292 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 EXTL2P1-201ENST00000446218 416 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AL157884.3-201ENST00000448273 1184 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RARRES2P3-201ENST00000457739 473 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC008379.1-201ENST00000463655 464 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MTND4LP3-201ENST00000468320 276 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC020779.1-201ENST00000478757 796 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RN7SL654P-201ENST00000479178 292 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 NPM1P29-201ENST00000483112 803 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RN7SL37P-201ENST00000490461 307 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC055733.3-201ENST00000505214 523 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RN7SKP196-201ENST00000516267 345 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 OR9G2P-201ENST00000533326 880 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC121758.1-202ENST00000556917 658 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 OOSP1P2-201ENST00000579644 351 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC007255.2-201ENST00000604053 631 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 NDUFB9P1-201ENST00000604683 510 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC067838.1-201ENST00000606064 577 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC004775.1-201ENST00000607389 753 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC245297.2-201ENST00000610119 565 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC073534.2-201ENST00000620377 381 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC123767.1-202ENST00000620407 817 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TPTE2P2-201ENST00000403471 1466 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 OR4C1P-202ENST00000641065 1569 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 SNORA64.3-201ENST00000365647 134 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AC244452.1-201ENST00000413798 141 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 RPL17P17-201ENST00000419491 557 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 LSM3P3-201ENST00000436601 306 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AL138878.2-201ENST00000440581 1241 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AL355355.1-201ENST00000442900 793 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 OR2L9P-201ENST00000444456 913 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AC004022.1-201ENST00000447766 1066 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 PRDX1P1-201ENST00000449329 596 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 AL133217.1-201ENST00000450980 425 ntBASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNGAP1Q96PV0 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms