Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC128677.1-201ENST00000436016 442 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AL356121.1-201ENST00000442911 156 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC245291.3-201ENST00000443400 292 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 RBMY2HP-201ENST00000457961 720 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC104849.1-201ENST00000462623 405 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 MRPL57P6-201ENST00000506570 309 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 RNA5SP418-201ENST00000515951 117 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC124891.1-201ENST00000536322 519 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC073046.2-201ENST00000604756 527 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AL138693.1-201ENST00000622219 129 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 ICE2P1-201ENST00000512800 1849 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF101P1-201ENST00000435701 1720 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 NCOA4P2-201ENST00000340589 1813 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AL353626.3-201ENST00000413399 657 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC013410.2-201ENST00000422627 201 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 RN7SL714P-201ENST00000487050 298 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 TDGP1-201ENST00000543961 1229 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AL158211.2-201ENST00000607282 395 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC024933.1-201ENST00000608472 348 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AL008723.3-201ENST00000608926 449 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC007603.3-201ENST00000636915 979 ntBASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP3Q96JB5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 RNU6-670P-201ENST00000364312 104 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 SNORA64.3-201ENST00000365647 134 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 NACAP7-201ENST00000407371 609 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL360013.1-201ENST00000419031 858 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL691517.1-201ENST00000440833 1235 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 VPS25P1-201ENST00000455691 508 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 RN7SL39P-201ENST00000462264 297 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 OR9A1P-202ENST00000484361 945 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms