Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CXCR2P1-202ENST00000443392 1074 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC010240.2-201ENST00000445363 1205 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC083906.1-201ENST00000509298 406 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 PRMT5P1-201ENST00000514351 598 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AL133399.1-201ENST00000527476 298 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AL356986.1-201ENST00000604085 341 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AL365181.4-201ENST00000609800 547 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AL137246.2-201ENST00000613439 662 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC010809.3-201ENST00000621310 641 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC018692.2-201ENST00000624130 348 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF4Q92544 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF4Q92544 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF4Q92544 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF4Q92544 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TM9SF4Q92544 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF4Q92544 AC022613.3-201ENST00000560740 1346 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 HSPD1P9-201ENST00000420325 1636 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.96□□□□□ -1.46
TM9SF4Q92544 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 COX6B1P3-201ENST00000312310 260 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 RN7SKP275-201ENST00000364626 301 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC004386.1-201ENST00000393214 761 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL354707.3-201ENST00000427308 331 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 NPM1P27-201ENST00000502784 830 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AP001804.1-201ENST00000526868 919 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 TRIM51DP-201ENST00000529746 596 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 OR4A6P-201ENST00000534364 970 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL157899.1-201ENST00000604110 936 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 RPSAP75-201ENST00000605848 301 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC073389.3-201ENST00000609434 935 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AL118556.2-201ENST00000614375 824 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC005899.7-201ENST00000618199 588 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 FAM27E2-201ENST00000619668 403 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AC063952.1-203ENST00000634410 658 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 DNM1P47-203ENST00000571780 12667 ntBASIC5.95□□□□□ -1.46
TM9SF4Q92544 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF4Q92544 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF4Q92544 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TM9SF4Q92544 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms