Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC114546.4-201ENST00000624413 369 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MKKS-204ENST00000639674 192 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MTND5P23-201ENST00000430812 1655 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 HSPD1P9-201ENST00000420325 1636 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 UGT2B26P-201ENST00000508672 1613 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 VEZF1P1-201ENST00000423931 1541 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC007614.2-201ENST00000569877 1851 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AP002001.2-201ENST00000529025 1469 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 CYP1D1P-201ENST00000416662 1433 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC107982.1-201ENST00000507171 1300 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC012078.1-201ENST00000405035 1646 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC008033.1-201ENST00000216407 1162 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RNU6-1011P-201ENST00000384668 107 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RNU6-248P-201ENST00000410720 107 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AL136380.2-201ENST00000411837 492 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RPL7L1P12-201ENST00000417594 729 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 CYCSP11-201ENST00000436426 315 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RAB11AP1-201ENST00000442978 646 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 FTH1P27-201ENST00000449509 551 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC092570.2-201ENST00000452117 1143 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 LARP1BP2-201ENST00000486594 519 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL239P-201ENST00000490061 300 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 CFL1P5-201ENST00000508046 502 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AP002469.1-201ENST00000526011 1043 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AP000445.1-201ENST00000526692 741 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC104383.1-201ENST00000530297 370 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 OR6M3P-201ENST00000531567 700 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC008083.2-201ENST00000546707 476 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 NUTF2P6-201ENST00000560892 385 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC136618.2-201ENST00000575091 400 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 C8orf59P2-201ENST00000603441 271 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RNU6-88P-201ENST00000606801 100 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC234782.5-201ENST00000617723 324 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC012254.5-201ENST00000623573 478 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AC046144.1-201ENST00000478559 1853 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 CDR1-202ENST00000625883 1485 ntBASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms