Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 RNA5SP477-201ENST00000362639 119 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LCN1P2-201ENST00000372030 223 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 HMGA1P8-201ENST00000414130 321 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC066692.1-201ENST00000421721 457 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC006455.6-201ENST00000426192 893 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 ATP5LP2-201ENST00000440646 311 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 PCNPP2-201ENST00000441651 455 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC079922.1-201ENST00000443291 359 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 RPL5P10-201ENST00000445207 894 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AL445466.1-201ENST00000448432 357 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AL035690.1-201ENST00000490892 383 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 TRIM77BP-201ENST00000524985 1119 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC027369.2-201ENST00000528030 440 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC090651.1-201ENST00000567865 634 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC067773.1-201ENST00000603284 1094 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC092574.1-201ENST00000609771 420 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC096708.4-201ENST00000620563 552 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 OR6C71P-202ENST00000641886 1107 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 CASC19-243ENST00000641588 1546 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AC092724.1-201ENST00000624623 3397 ntBASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BHLHA9Q7RTU4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC009831.5-201ENST00000624000 3189 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 QRSL1P1-201ENST00000400977 1540 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 SEPT7P2-202ENST00000398921 823 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RPS7P8-201ENST00000418311 581 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RPL12P12-201ENST00000424633 501 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC115283.1-201ENST00000427353 400 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC005077.1-201ENST00000449226 375 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CFL1P4-201ENST00000451536 498 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AL359839.1-201ENST00000451975 1160 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC098847.1-201ENST00000473094 348 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC117394.1-201ENST00000477323 567 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RN7SL193P-201ENST00000491708 276 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 NANOGNBP2-201ENST00000544753 553 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RPA2P1-201ENST00000556557 721 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC005726.4-201ENST00000582858 458 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AF230666.2-201ENST00000602328 725 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC011458.1-201ENST00000604034 617 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC017076.1-201ENST00000607613 578 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AC097065.2-201ENST00000608159 533 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 AL031123.3-201ENST00000623345 1837 ntBASIC6.32□□□□□ -1.4
BHLHA9Q7RTU4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms