Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 RBMX2P4-201ENST00000441256 376 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 DBIL5P2-201ENST00000443827 253 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC026254.2-201ENST00000475295 371 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 RPL10P7-201ENST00000495649 625 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 RBMS2P1-201ENST00000525031 1226 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 OR5BK1P-201ENST00000550421 823 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC105275.2-201ENST00000567907 711 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC021749.1-201ENST00000604322 607 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 Z82195.1-201ENST00000604558 398 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 uc_338.37-201ENST00000620113 186 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC022743.1-201ENST00000624990 664 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AP003471.1-202ENST00000319051 1988 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AP000766.1-201ENST00000561746 4140 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 VN2R1P-201ENST00000449668 1743 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AL049737.1-201ENST00000413920 1403 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 Y_RNA.88-201ENST00000363029 99 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 RNU4-4P-201ENST00000364588 130 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AL161449.1-201ENST00000414531 1199 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC011233.1-201ENST00000422812 283 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AL022324.2-201ENST00000434827 780 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 LINC00328-2P-201ENST00000436585 219 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 CHCHD4P5-201ENST00000436684 427 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 ELOCP8-201ENST00000439309 332 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AL357520.1-201ENST00000441557 453 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 ELOCP15-201ENST00000442090 332 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 RN7SKP198-201ENST00000459286 306 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 OR5F2P-201ENST00000532761 941 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 OR7E161P-201ENST00000533722 967 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 BTG1P1-201ENST00000540396 508 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC011270.1-201ENST00000558606 583 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC091932.1-201ENST00000569381 427 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC138207.8-204ENST00000579588 527 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC061975.3-201ENST00000583209 244 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 IGLJCOR18-201ENST00000584002 424 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 BUB1P1-201ENST00000603541 607 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 MIR1264-201ENST00000616374 69 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms