Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL161756.3-201ENST00000641216 2071 ntBASIC6.76□□□□□ -1.33
TPM4P67936 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TPM4P67936 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TPM4P67936 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TPM4P67936 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 AC109446.4-201ENST00000623235 2755 ntBASIC6.75□□□□□ -1.33
TPM4P67936 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM4P67936 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM4P67936 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 METTL15P3-201ENST00000415522 1221 ntBASIC6.75□□□□□ -1.33
TPM4P67936 AK3P5-201ENST00000432033 519 ntBASIC6.75□□□□□ -1.33
TPM4P67936 ACA64.4-201ENST00000459070 127 ntBASIC6.75□□□□□ -1.33
TPM4P67936 RN7SL552P-201ENST00000462094 276 ntBASIC6.75□□□□□ -1.33
TPM4P67936 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 OR4D12P-201ENST00000509361 911 ntBASIC6.75□□□□□ -1.33
TPM4P67936 AC090958.1-201ENST00000511122 351 ntBASIC6.75□□□□□ -1.33
TPM4P67936 OR8Q1P-201ENST00000526467 655 ntBASIC6.75□□□□□ -1.33
TPM4P67936 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM4P67936 AC007346.2-201ENST00000564816 892 ntBASIC6.75□□□□□ -1.33
TPM4P67936 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM4P67936 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM4P67936 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM4P67936 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 AC008555.7-201ENST00000605008 583 ntBASIC6.75□□□□□ -1.33
TPM4P67936 AP003108.4-201ENST00000623917 878 ntBASIC6.75□□□□□ -1.33
TPM4P67936 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
TPM4P67936 AC099654.15-201ENST00000639802 509 ntBASIC6.75□□□□□ -1.33
TPM4P67936 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
TPM4P67936 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
TPM4P67936 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM4P67936 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM4P67936 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.74□□□□□ -1.33
TPM4P67936 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 RNA5SP375-201ENST00000362975 119 ntBASIC6.74□□□□□ -1.33
TPM4P67936 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 MIR301B-201ENST00000390813 78 ntBASIC6.74□□□□□ -1.33
TPM4P67936 RPL11P3-201ENST00000395256 523 ntBASIC6.74□□□□□ -1.33
TPM4P67936 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TPM4P67936 VIM2P-201ENST00000402383 1294 ntBASIC6.74□□□□□ -1.33
TPM4P67936 FTH1P26-201ENST00000406512 701 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AL353133.1-201ENST00000407695 401 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AC245096.1-201ENST00000413104 546 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 RPS7P14-201ENST00000426405 583 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM4P67936 GTF3AP6-201ENST00000432585 986 ntBASIC6.74□□□□□ -1.33
TPM4P67936 POU5F1P5-201ENST00000445059 658 ntBASIC6.74□□□□□ -1.33
TPM4P67936 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM4P67936 AC105391.1-201ENST00000503155 1045 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM4P67936 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM4P67936 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM4P67936 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM4P67936 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.74□□□□□ -1.33
TPM4P67936 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TPM4P67936 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 AC093524.1-201ENST00000564266 1094 ntBASIC6.74□□□□□ -1.33
TPM4P67936 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM4P67936 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
TPM4P67936 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM4P67936 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
TPM4P67936 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 AC004076.2-201ENST00000620532 3323 ntBASIC6.73□□□□□ -1.33
TPM4P67936 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms