Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 SHQ1P1-201ENST00000437111 1544 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RIPK4P57078 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.98□□□□□ -1.13
RIPK4P57078 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
RIPK4P57078 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
RIPK4P57078 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.98□□□□□ -1.13
RIPK4P57078 RPL12P12-201ENST00000424633 501 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 DNAJA1P5-201ENST00000440278 943 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 TRIM60P16-201ENST00000444048 694 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.98□□□□□ -1.13
RIPK4P57078 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.98□□□□□ -1.13
RIPK4P57078 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.98□□□□□ -1.13
RIPK4P57078 AC096708.4-201ENST00000620563 552 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 AC024884.1-201ENST00000620583 399 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 AL136228.1-201ENST00000622221 319 ntBASIC7.98□□□□□ -1.13
RIPK4P57078 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.98□□□□□ -1.13
RIPK4P57078 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.98□□□□□ -1.13
RIPK4P57078 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.98□□□□□ -1.13
RIPK4P57078 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RIPK4P57078 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.97□□□□□ -1.13
RIPK4P57078 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC009779.8-201ENST00000641684 4384 ntBASIC7.97□□□□□ -1.13
RIPK4P57078 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.97□□□□□ -1.13
RIPK4P57078 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.97□□□□□ -1.13
RIPK4P57078 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 RPL23AP60-201ENST00000450011 454 ntBASIC7.97□□□□□ -1.13
RIPK4P57078 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.97□□□□□ -1.13
RIPK4P57078 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.97□□□□□ -1.13
RIPK4P57078 AP003080.1-202ENST00000526526 915 ntBASIC7.97□□□□□ -1.13
RIPK4P57078 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.97□□□□□ -1.13
RIPK4P57078 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC027334.1-201ENST00000603257 310 ntBASIC7.97□□□□□ -1.13
RIPK4P57078 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.97□□□□□ -1.13
RIPK4P57078 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RIPK4P57078 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.97□□□□□ -1.13
RIPK4P57078 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RIPK4P57078 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RIPK4P57078 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.96□□□□□ -1.13
RIPK4P57078 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.96□□□□□ -1.14
RIPK4P57078 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.96□□□□□ -1.14
RIPK4P57078 LCN1P2-201ENST00000372030 223 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.96□□□□□ -1.14
RIPK4P57078 PTCD2P2-201ENST00000415579 1095 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.96□□□□□ -1.14
RIPK4P57078 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.96□□□□□ -1.14
RIPK4P57078 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AC016027.4-201ENST00000450866 277 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 NDUFA5P5-201ENST00000468361 342 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AC025458.1-201ENST00000506046 166 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.96□□□□□ -1.14
RIPK4P57078 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RIPK4P57078 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.96□□□□□ -1.14
RIPK4P57078 RPA2P1-201ENST00000556557 721 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.96□□□□□ -1.14
RIPK4P57078 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.96□□□□□ -1.14
RIPK4P57078 AC108673.3-201ENST00000609183 335 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RIPK4P57078 MIR6809-201ENST00000612189 116 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 AP004289.1-201ENST00000436307 2205 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RIPK4P57078 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.96□□□□□ -1.14
RIPK4P57078 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms