Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH4P55283 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH4P55283 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH4P55283 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 AC024587.1-201ENST00000505925 2157 ntBASIC6.3□□□□□ -1.4
CDH4P55283 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH4P55283 OOSP1-201ENST00000398992 1270 ntBASIC6.3□□□□□ -1.4
CDH4P55283 AL132875.1-201ENST00000403623 949 ntBASIC6.3□□□□□ -1.4
CDH4P55283 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AMYP1-201ENST00000440059 1023 ntBASIC6.3□□□□□ -1.4
CDH4P55283 TRIM60P16-201ENST00000444048 694 ntBASIC6.3□□□□□ -1.4
CDH4P55283 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.3□□□□□ -1.4
CDH4P55283 AC068228.1-201ENST00000461723 211 ntBASIC6.3□□□□□ -1.4
CDH4P55283 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH4P55283 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH4P55283 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH4P55283 AL499605.1-201ENST00000604628 403 ntBASIC6.3□□□□□ -1.4
CDH4P55283 AC004801.6-201ENST00000616571 978 ntBASIC6.3□□□□□ -1.4
CDH4P55283 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH4P55283 AP001885.1-201ENST00000621658 558 ntBASIC6.3□□□□□ -1.4
CDH4P55283 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 AC006511.3-201ENST00000624929 1783 ntBASIC6.3□□□□□ -1.4
CDH4P55283 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 AC093225.1-201ENST00000506867 1408 ntBASIC6.3□□□□□ -1.4
CDH4P55283 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CDH4P55283 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH4P55283 SHQ1P1-201ENST00000437111 1544 ntBASIC6.3□□□□□ -1.4
CDH4P55283 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 AC137056.2-201ENST00000624055 1958 ntBASIC6.29□□□□□ -1.4
CDH4P55283 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH4P55283 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDH4P55283 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 RNA5SP433-201ENST00000364491 114 ntBASIC6.29□□□□□ -1.4
CDH4P55283 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.29□□□□□ -1.4
CDH4P55283 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.29□□□□□ -1.4
CDH4P55283 AL022319.1-201ENST00000458183 1167 ntBASIC6.29□□□□□ -1.4
CDH4P55283 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 AC130360.2-201ENST00000533477 1556 ntBASIC6.29□□□□□ -1.4
CDH4P55283 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH4P55283 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH4P55283 AC008507.3-201ENST00000585753 472 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AC020916.2-201ENST00000591242 360 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.29□□□□□ -1.4
CDH4P55283 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 AC068768.2-201ENST00000602352 343 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH4P55283 AC073488.3-201ENST00000631611 778 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AL162456.1-201ENST00000634535 2006 ntBASIC6.29□□□□□ -1.4
CDH4P55283 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH4P55283 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH4P55283 RBMY1HP-201ENST00000382759 1389 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AL354854.1-201ENST00000455940 1363 ntBASIC6.29□□□□□ -1.4
CDH4P55283 AC008957.3-201ENST00000624112 2242 ntBASIC6.29□□□□□ -1.4
CDH4P55283 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH4P55283 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH4P55283 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH4P55283 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 ZNF402P-201ENST00000404435 3100 ntBASIC6.28□□□□□ -1.4
CDH4P55283 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms