Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC095052.1-201ENST00000509955 863 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 ATP5LP3-201ENST00000514223 304 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.37□□□□□ -1.39
LIMK1P53667 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.37□□□□□ -1.39
LIMK1P53667 RN7SL208P-201ENST00000577964 296 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 RN7SL404P-201ENST00000582421 281 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 AC111186.1-201ENST00000604684 130 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.37□□□□□ -1.39
LIMK1P53667 SDR42E1P1-201ENST00000611327 477 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 AC004801.6-201ENST00000616571 978 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 LINC02495-203ENST00000636704 242 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 AL021877.2-201ENST00000624442 10684 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 Z97989.1-201ENST00000531702 2421 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 RNF19BPY-201ENST00000458209 1550 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC011503.2-201ENST00000594230 1500 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMK1P53667 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIMK1P53667 AL096800.1-201ENST00000405326 893 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIMK1P53667 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIMK1P53667 AL590004.3-202ENST00000445883 451 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC098847.1-201ENST00000473094 348 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC008429.2-201ENST00000523057 864 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 OR4A21P-201ENST00000532759 944 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMK1P53667 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC007346.1-201ENST00000569208 867 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 MIR4700-201ENST00000578311 74 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AP005136.2-201ENST00000583253 1049 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC009237.12-201ENST00000604755 742 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 AC092681.3-201ENST00000609463 678 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 MIR6085-201ENST00000618314 110 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC073488.9-201ENST00000631601 754 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMK1P53667 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMK1P53667 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIMK1P53667 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 MTCO1P25-201ENST00000414449 1799 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMK1P53667 AC005618.1-201ENST00000606901 3148 ntBASIC6.36□□□□□ -1.39
LIMK1P53667 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMK1P53667 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIMK1P53667 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.35□□□□□ -1.39
LIMK1P53667 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIMK1P53667 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIMK1P53667 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 RNA5SP477-201ENST00000362639 119 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 RN7SKP292-201ENST00000365522 317 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 MIR130B-202ENST00000385018 82 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 EEF1B2P8-201ENST00000414101 671 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 PRUNEP1-201ENST00000425846 705 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms