Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 MRRFP1-201ENST00000435941 1675 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC10.51□□□□□ -0.73
SMARCA4P51532 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
SMARCA4P51532 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC10.51□□□□□ -0.73
SMARCA4P51532 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SMARCA4P51532 FABP12P1-201ENST00000401911 322 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 VDAC1P2-201ENST00000423609 850 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.51□□□□□ -0.73
SMARCA4P51532 PSMD10P3-201ENST00000437000 448 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 AL035090.1-201ENST00000454835 332 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 RPSAP50-201ENST00000481955 852 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 RPS21P4-201ENST00000487122 248 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC10.51□□□□□ -0.73
SMARCA4P51532 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC10.51□□□□□ -0.73
SMARCA4P51532 AC015720.2-201ENST00000567709 334 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 MIR8089-201ENST00000620165 82 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SMARCA4P51532 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SMARCA4P51532 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SMARCA4P51532 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SMARCA4P51532 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SMARCA4P51532 AC022905.1-201ENST00000503430 3048 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SMARCA4P51532 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 SNORA56-201ENST00000383966 129 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 RNA5SP339-201ENST00000390987 122 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 NENFP1-201ENST00000419476 466 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 RPA2P2-201ENST00000419698 796 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 AC006335.2-201ENST00000437993 330 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 SCARNA6.1-201ENST00000516989 238 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 RBM22P12-201ENST00000567098 1255 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 SNORD91A-202ENST00000609620 191 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 AC008115.3-201ENST00000614874 549 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 AL118522.2-201ENST00000616045 615 ntBASIC10.5□□□□□ -0.73
SMARCA4P51532 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SMARCA4P51532 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC10.5□□□□□ -0.73
SMARCA4P51532 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SMARCA4P51532 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SMARCA4P51532 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
SMARCA4P51532 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SMARCA4P51532 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC10.49□□□□□ -0.73
SMARCA4P51532 MIR550A3-201ENST00000390735 95 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC10.49□□□□□ -0.73
SMARCA4P51532 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC10.49□□□□□ -0.73
SMARCA4P51532 CYCSP6-201ENST00000434498 302 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 AC126177.5-201ENST00000549599 178 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC10.49□□□□□ -0.73
SMARCA4P51532 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC10.49□□□□□ -0.73
SMARCA4P51532 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC10.49□□□□□ -0.73
SMARCA4P51532 AL121612.2-201ENST00000612261 482 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 AL390318.1-201ENST00000624564 687 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SMARCA4P51532 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 PARP4P1-201ENST00000435945 2337 ntBASIC10.49□□□□□ -0.73
SMARCA4P51532 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SMARCA4P51532 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMARCA4P51532 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC10.48□□□□□ -0.73
SMARCA4P51532 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC10.48□□□□□ -0.73
SMARCA4P51532 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMARCA4P51532 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMARCA4P51532 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMARCA4P51532 AC009784.1-201ENST00000426484 460 ntBASIC10.48□□□□□ -0.73
SMARCA4P51532 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC10.48□□□□□ -0.73
SMARCA4P51532 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SMARCA4P51532 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMARCA4P51532 FTO-215ENST00000636491 1676 ntTSL 5 BASIC10.48□□□□□ -0.73
SMARCA4P51532 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SMARCA4P51532 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMARCA4P51532 AC009804.1-201ENST00000400949 179 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 PRUNEP1-201ENST00000425846 705 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 RN7SL165P-201ENST00000477476 291 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AC110775.1-201ENST00000513721 462 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 KCTD9P4-201ENST00000526766 1166 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AC004825.1-201ENST00000555068 586 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms