Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.13□□□□□ -1.27
NEDD4P46934 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.13□□□□□ -1.27
NEDD4P46934 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NEDD4P46934 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEDD4P46934 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 IMMTP1-201ENST00000435590 2219 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 AL033543.1-201ENST00000623440 13454 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD4P46934 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 DNAJA1P5-201ENST00000440278 943 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 HMGN1P2-201ENST00000445197 310 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 AC025458.1-201ENST00000506046 166 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NEDD4P46934 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.12□□□□□ -1.27
NEDD4P46934 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 AC027369.2-201ENST00000528030 440 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.12□□□□□ -1.27
NEDD4P46934 AC007494.1-201ENST00000562293 760 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 AC024884.1-201ENST00000620583 399 ntBASIC7.12□□□□□ -1.27
NEDD4P46934 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD4P46934 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD4P46934 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD4P46934 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD4P46934 ZNF101P1-201ENST00000435701 1720 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD4P46934 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.11□□□□□ -1.27
NEDD4P46934 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.11□□□□□ -1.27
NEDD4P46934 RNA5SP273-201ENST00000362484 113 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AC004386.1-201ENST00000393214 761 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AKR1B10P1-201ENST00000425765 942 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AC115283.1-201ENST00000427353 400 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AL731534.1-201ENST00000434711 269 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AL138899.2-201ENST00000439139 499 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 TRIM60P16-201ENST00000444048 694 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 SDC4P-201ENST00000453285 601 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 RAB28P2-201ENST00000454299 641 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AC114728.1-201ENST00000488289 483 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD4P46934 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD4P46934 AC068305.2-201ENST00000550567 1205 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD4P46934 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD4P46934 AL021918.2-201ENST00000613415 194 ntBASIC7.11□□□□□ -1.27
NEDD4P46934 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD4P46934 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD4P46934 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NEDD4P46934 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD4P46934 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NEDD4P46934 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD4P46934 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 ZNF658B-201ENST00000602828 3408 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 GNL2P1-201ENST00000451274 2190 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 TMSB4XP2-201ENST00000335179 210 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 RNA5SP477-201ENST00000362639 119 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 RNU1-59P-201ENST00000364829 162 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 MIR621-201ENST00000384919 96 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 SNRPEP6-201ENST00000407465 277 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 RPS26P38-201ENST00000414476 348 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD4P46934 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC066692.1-201ENST00000421721 457 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 AC016027.5-201ENST00000427227 210 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD4P46934 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC005077.1-201ENST00000449226 375 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 RPL7L1P3-201ENST00000455249 689 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD4P46934 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC008429.4-201ENST00000521201 182 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 OR56A7P-201ENST00000524865 941 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC244502.2-201ENST00000543361 851 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 369.4 ms