Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC096921.2-201ENST00000561507 1916 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AP001541.1-201ENST00000623322 1904 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 RNA5SP346-201ENST00000363541 121 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AL139805.1-201ENST00000407837 289 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 MTND4LP21-201ENST00000415303 295 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 THEM7P-201ENST00000419556 672 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 PPIAP10-201ENST00000438675 458 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 RPL7L1P3-201ENST00000455249 689 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 H3F3AP5-201ENST00000475267 429 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 MARK2P8-201ENST00000476069 952 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AL117692.1-201ENST00000494283 713 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC005828.7-201ENST00000607331 556 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC096586.2-201ENST00000610260 441 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 MIR6780B-201ENST00000610307 79 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AC003992.1-201ENST00000635364 557 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 HDAC1P2-201ENST00000453661 1398 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DPA1P20036 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AKAP17BP-201ENST00000431706 2719 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 NCOA4P2-201ENST00000340589 1813 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RNU1-49P-201ENST00000363468 159 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 SNORA43.1-201ENST00000364863 140 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RNA5SP198-201ENST00000410376 127 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AL359885.1-201ENST00000415786 903 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 NFYAP1-201ENST00000431953 972 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC097359.1-201ENST00000447946 463 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AL451063.1-201ENST00000450164 1133 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AL133351.3-201ENST00000454998 193 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AL022319.1-201ENST00000458183 1167 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RPS27P20-201ENST00000492051 246 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RN7SKP183-201ENST00000517169 324 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 OR6M2P-201ENST00000529831 871 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC005632.2-201ENST00000564271 828 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 uc_338.29-201ENST00000615099 168 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AC090181.3-201ENST00000624777 1514 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DPA1P20036 AL359091.1-201ENST00000449048 1734 ntBASIC6.28□□□□□ -1.4
HLA-DPA1P20036 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
HLA-DPA1P20036 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC024651.2-201ENST00000562480 2098 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms