Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RPS17P11-201ENST00000474297 293 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 AC004263.1-201ENST00000479327 332 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC093770.1-201ENST00000511559 571 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC004923.2-201ENST00000529649 369 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 OR9G2P-201ENST00000533326 880 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 AC140063.1-201ENST00000541343 259 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.41□□□□□ -1.22
ITGA4P13612 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC245008.1-201ENST00000608123 476 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC079416.3-201ENST00000624479 549 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 AC006927.2-201ENST00000639256 389 ntBASIC7.41□□□□□ -1.22
ITGA4P13612 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.41□□□□□ -1.22
ITGA4P13612 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.41□□□□□ -1.22
ITGA4P13612 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ITGA4P13612 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
ITGA4P13612 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.4□□□□□ -1.22
ITGA4P13612 MAPK10-344ENST00000641718 3746 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 CLCA3P-203ENST00000490028 2781 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ITGA4P13612 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ITGA4P13612 CYCSP17-201ENST00000407870 315 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 RPL23AP18-201ENST00000416139 468 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 MTCYBP7-201ENST00000419540 1134 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC010099.3-201ENST00000423896 409 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 USP9YP24-201ENST00000434374 697 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 PMS2P9-201ENST00000441237 515 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 USP9YP17-201ENST00000444617 696 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AC044797.1-201ENST00000445744 679 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC112492.1-201ENST00000449607 712 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC099670.1-201ENST00000455141 783 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AKR1D1P1-201ENST00000457236 936 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AC020779.1-201ENST00000478757 796 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 RN7SL187P-201ENST00000495587 303 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 HAUS1P3-201ENST00000523909 662 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 SNRPCP6-201ENST00000528310 210 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ITGA4P13612 AC007068.2-201ENST00000543168 395 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 TDGP1-201ENST00000543961 1229 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC016180.1-201ENST00000567945 403 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.4□□□□□ -1.22
ITGA4P13612 MIR3157-201ENST00000578688 85 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 OOSP1P2-201ENST00000579644 351 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.4□□□□□ -1.22
ITGA4P13612 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.4□□□□□ -1.22
ITGA4P13612 SNX6P1-201ENST00000601728 1224 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AC019257.2-201ENST00000605539 497 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AC099785.1-201ENST00000605697 437 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 AP002802.2-201ENST00000605877 235 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.4□□□□□ -1.22
ITGA4P13612 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms