Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 SOCS5P1-201ENST00000440415 949 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 CXCR2P1-202ENST00000443392 1074 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 AC234771.2-201ENST00000445718 597 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 AL162739.1-201ENST00000450606 307 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.14□□□□□ -1.59
SDCBPO00560 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.14□□□□□ -1.59
SDCBPO00560 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.14□□□□□ -1.59
SDCBPO00560 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.14□□□□□ -1.59
SDCBPO00560 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.14□□□□□ -1.59
SDCBPO00560 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.14□□□□□ -1.59
SDCBPO00560 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.14□□□□□ -1.59
SDCBPO00560 AP001357.1-201ENST00000586304 1053 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.14□□□□□ -1.59
SDCBPO00560 MIR6885-201ENST00000612241 66 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 GAPDHP41-201ENST00000613707 975 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 AP002833.3-201ENST00000625075 2265 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SDCBPO00560 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 AL161756.3-201ENST00000641216 2071 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.14□□□□□ -1.59
SDCBPO00560 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 CASC19-246ENST00000641625 1606 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.13□□□□□ -1.59
SDCBPO00560 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SDCBPO00560 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SDCBPO00560 SNORA77.2-201ENST00000408571 112 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 RN7SKP121-201ENST00000410842 305 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.13□□□□□ -1.59
SDCBPO00560 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.13□□□□□ -1.59
SDCBPO00560 RPS7P14-201ENST00000426405 583 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AC112492.2-201ENST00000432774 1030 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 OR2L9P-201ENST00000444456 913 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 GAPDHP23-201ENST00000444823 993 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 RPL5P10-201ENST00000445207 894 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.13□□□□□ -1.59
SDCBPO00560 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.13□□□□□ -1.59
SDCBPO00560 OR4D12P-201ENST00000509361 911 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 TOMM22P4-201ENST00000511318 336 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.13□□□□□ -1.59
SDCBPO00560 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.13□□□□□ -1.59
SDCBPO00560 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.13□□□□□ -1.59
SDCBPO00560 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.13□□□□□ -1.59
SDCBPO00560 AL136097.3-201ENST00000611097 505 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AC010998.3-201ENST00000613871 631 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AL031658.2-201ENST00000616850 651 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 AC089999.3-201ENST00000622440 577 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.13□□□□□ -1.59
SDCBPO00560 VN2R1P-201ENST00000449668 1743 ntBASIC5.13□□□□□ -1.59
SDCBPO00560 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.13□□□□□ -1.59
SDCBPO00560 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDCBPO00560 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.13□□□□□ -1.59
SDCBPO00560 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SDCBPO00560 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.13□□□□□ -1.59
SDCBPO00560 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SDCBPO00560 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.12□□□□□ -1.59
SDCBPO00560 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 RNA5SP375-201ENST00000362975 119 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 MIR551B-201ENST00000384984 96 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 RNU11-201ENST00000387069 134 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SDCBPO00560 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
SDCBPO00560 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.12□□□□□ -1.59
SDCBPO00560 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.12□□□□□ -1.59
SDCBPO00560 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.12□□□□□ -1.59
SDCBPO00560 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDCBPO00560 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.12□□□□□ -1.59
SDCBPO00560 PPIAP10-201ENST00000438675 458 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.12□□□□□ -1.59
SDCBPO00560 AC002075.1-201ENST00000457396 676 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.12□□□□□ -1.59
SDCBPO00560 RPL12P31-201ENST00000478433 450 ntBASIC5.12□□□□□ -1.59
SDCBPO00560 AC093719.1-201ENST00000480427 441 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms