Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 TSPY6P-201ENST00000448518 926 ntBASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 AP001271.2-201ENST00000624018 1556 ntBASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA11Q9Y5H2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 MIR4758-201ENST00000577688 71 ntBASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA11Q9Y5H2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 DUSP5P2-201ENST00000426873 1033 ntBASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 GUSBP6-202ENST00000438529 1198 ntBASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 PHGDH-210ENST00000641115 1638 ntBASIC19.11■□□□□ 0.65
PCDHGA11Q9Y5H2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms