Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AC145285.6-201ENST00000604632 637 ntBASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AC027702.1-201ENST00000563810 1770 ntBASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 NUDT16P1-203ENST00000513809 620 ntBASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA9Q9Y5G4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 AP002982.1-201ENST00000492365 877 ntBASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 RN7SL850P-201ENST00000579959 291 ntBASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA9Q9Y5G4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGA9Q9Y5G4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 UNC93B2-201ENST00000285383 730 ntBASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 MIR2861-201ENST00000636310 90 ntBASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 AC092865.7-201ENST00000641832 219 ntBASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA9Q9Y5G4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AC124283.5-201ENST00000624661 1809 ntBASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 RBM17P1-201ENST00000453646 1190 ntBASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AL445228.2-201ENST00000605589 952 ntBASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms