Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGB3Q9Y5G1 AL020996.1-203ENST00000536896 2307 ntBASIC18.71■□□□□ 0.58
PCDHGB3Q9Y5G1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.71■□□□□ 0.58
PCDHGB3Q9Y5G1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB3Q9Y5G1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 AC093787.1-201ENST00000450396 207 ntBASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB3Q9Y5G1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB3Q9Y5G1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 AC098818.2-201ENST00000564925 2320 ntBASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 TMEM191A-211ENST00000637163 1067 ntBASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGB3Q9Y5G1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms