Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 FAM210CP-201ENST00000445714 574 ntBASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 MIR1224-201ENST00000408193 85 ntBASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB11Q9Y5F2 AL135905.2-201ENST00000584934 1404 ntBASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 RPS2P55-201ENST00000397318 883 ntBASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 AC239809.2-201ENST00000415381 517 ntBASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 AC107956.1-201ENST00000494359 873 ntBASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 AIRN-201ENST00000601203 4374 ntBASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB11Q9Y5F2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB11Q9Y5F2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 AC233702.5-201ENST00000584107 538 ntBASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 AC120498.8-201ENST00000614275 531 ntBASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms