Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAF6Q9Y4K3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF6Q9Y4K3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF6Q9Y4K3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAF6Q9Y4K3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 AL032819.2-201ENST00000624543 2162 ntBASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 DUX4L16-201ENST00000555130 1264 ntBASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF6Q9Y4K3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF6Q9Y4K3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
TRAF6Q9Y4K3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 CYP2T3P-201ENST00000601990 817 ntBASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 MIR6821-201ENST00000617625 74 ntBASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF6Q9Y4K3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 PHGDH-210ENST00000641115 1638 ntBASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF6Q9Y4K3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms