Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 KRT87P-202ENST00000534226 1464 ntBASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 MIR572-201ENST00000384983 95 ntBASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 AC138907.5-202ENST00000569484 235 ntBASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 AC008764.7-201ENST00000593779 1081 ntBASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 TPRG1LP1-201ENST00000598702 760 ntBASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCL1Q9Y2P8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 UNC93B3-201ENST00000308076 687 ntBASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 AC099791.1-201ENST00000416440 715 ntBASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 AL356441.2-201ENST00000443009 864 ntBASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 AC024257.2-201ENST00000549699 147 ntBASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.11■□□□□ 0.17
RCL1Q9Y2P8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 AL049812.1-201ENST00000432563 2267 ntBASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 FAM21FP-204ENST00000608637 956 ntBASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RCL1Q9Y2P8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms