Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 TMPOP1-202ENST00000424642 1267 ntBASIC27.09■■□□□ 1.93
NINLQ9Y2I6 PPP1R14BP5-201ENST00000440334 435 ntBASIC27.09■■□□□ 1.93
NINLQ9Y2I6 RBM17P1-201ENST00000453646 1190 ntBASIC27.09■■□□□ 1.93
NINLQ9Y2I6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
NINLQ9Y2I6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC27.08■■□□□ 1.93
NINLQ9Y2I6 AL162377.1-201ENST00000618844 1793 ntBASIC27.08■■□□□ 1.92
NINLQ9Y2I6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC27.08■■□□□ 1.92
NINLQ9Y2I6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 GOLGA2P11-201ENST00000562660 1621 ntBASIC27.07■■□□□ 1.92
NINLQ9Y2I6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 GABARAPL3-202ENST00000624044 1851 ntBASIC27.07■■□□□ 1.92
NINLQ9Y2I6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC27.07■■□□□ 1.92
NINLQ9Y2I6 TMEM179-206ENST00000616017 1645 ntBASIC27.07■■□□□ 1.92
NINLQ9Y2I6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.06■■□□□ 1.92
NINLQ9Y2I6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC27.06■■□□□ 1.92
NINLQ9Y2I6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC27.06■■□□□ 1.92
NINLQ9Y2I6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.06■■□□□ 1.92
NINLQ9Y2I6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
NINLQ9Y2I6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 CR392000.1-201ENST00000624770 1228 ntBASIC27.05■■□□□ 1.92
NINLQ9Y2I6 AL031985.4-201ENST00000642138 673 ntBASIC27.05■■□□□ 1.92
NINLQ9Y2I6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
NINLQ9Y2I6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 UNC93B2-201ENST00000285383 730 ntBASIC27.04■■□□□ 1.92
NINLQ9Y2I6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 DGCR10-201ENST00000609839 495 ntBASIC27.04■■□□□ 1.92
NINLQ9Y2I6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NINLQ9Y2I6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 MESTP1-201ENST00000404287 994 ntBASIC27.03■■□□□ 1.92
NINLQ9Y2I6 AC004980.1-204ENST00000429707 299 ntBASIC27.03■■□□□ 1.92
NINLQ9Y2I6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 ABBA01031674.1-201ENST00000635145 728 ntBASIC27.03■■□□□ 1.92
NINLQ9Y2I6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
NINLQ9Y2I6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NINLQ9Y2I6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms