Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 AC011298.2-201ENST00000617989 482 ntBASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 AC012313.10-201ENST00000623509 926 ntBASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 MIR2861-201ENST00000636310 90 ntBASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 AL024507.2-201ENST00000606070 2574 ntBASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 KRT8P20-201ENST00000423953 1409 ntBASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 PVRIG2P-201ENST00000435460 978 ntBASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 AC006538.3-201ENST00000612495 578 ntBASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 AL023803.3-201ENST00000615559 522 ntBASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3H4Q9UPT8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 YBX1P10-201ENST00000444752 975 ntBASIC24■■□□□ 1.43
ZC3H4Q9UPT8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 KRT18P16-201ENST00000510337 1294 ntBASIC24■■□□□ 1.43
ZC3H4Q9UPT8 PRSS44-201ENST00000515154 1146 ntBASIC24■■□□□ 1.43
ZC3H4Q9UPT8 AL441883.1-201ENST00000566170 1045 ntBASIC24■■□□□ 1.43
ZC3H4Q9UPT8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZC3H4Q9UPT8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 AC004951.3-201ENST00000418645 1148 ntBASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 AC023511.2-201ENST00000618803 211 ntBASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3H4Q9UPT8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3H4Q9UPT8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.97■■□□□ 1.43
ZC3H4Q9UPT8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms