Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC093323.1-202ENST00000635031 2045 ntBASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 AC027796.2-201ENST00000575326 344 ntBASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC31.71■■■□□ 2.67
RIMBP3Q9UFD9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RIMBP3Q9UFD9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC31.7■■■□□ 2.67
RIMBP3Q9UFD9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
RIMBP3Q9UFD9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 KRT16P4-201ENST00000453883 522 ntBASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 KRT18P31-201ENST00000506277 1292 ntBASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 TPSP2-201ENST00000561760 610 ntBASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC31.7■■■□□ 2.66
RIMBP3Q9UFD9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 RASA4DP-201ENST00000460726 1199 ntBASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RIMBP3Q9UFD9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 HLA-A-209ENST00000638375 975 ntBASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
RIMBP3Q9UFD9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 COX10-202ENST00000429152 875 ntTSL 2 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 AC091304.2-201ENST00000564639 760 ntBASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIMBP3Q9UFD9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 POLD2P1-201ENST00000511220 997 ntBASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 PNN-202ENST00000553331 656 ntTSL 3 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 AL121772.3-201ENST00000610840 674 ntBASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC31.66■■■□□ 2.66
RIMBP3Q9UFD9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RIMBP3Q9UFD9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 AC012615.1-201ENST00000565797 1299 ntBASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms