Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 AP002982.1-201ENST00000492365 877 ntBASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 AL512408.1-201ENST00000569378 2000 ntBASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE7Q9UBL6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 YBX1P10-201ENST00000444752 975 ntBASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 CD177P1-201ENST00000606252 935 ntBASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 AC073195.1-201ENST00000607241 877 ntBASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE7Q9UBL6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 AL353708.3-201ENST00000610272 989 ntBASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE7Q9UBL6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE7Q9UBL6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE7Q9UBL6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE7Q9UBL6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.14■□□□□ 0.66
CPNE7Q9UBL6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 GABARAPL3-202ENST00000624044 1851 ntBASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 FAM197Y1-201ENST00000421178 764 ntBASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE7Q9UBL6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms