Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RLIMQ9NVW2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 AC133552.2-202ENST00000575694 574 ntBASIC18.38■□□□□ 0.53
RLIMQ9NVW2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RLIMQ9NVW2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 C2orf69P4-201ENST00000565394 541 ntBASIC18.37■□□□□ 0.53
RLIMQ9NVW2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 RAP2CP1-201ENST00000605103 478 ntBASIC18.37■□□□□ 0.53
RLIMQ9NVW2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RLIMQ9NVW2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 KRT8P20-201ENST00000423953 1409 ntBASIC18.36■□□□□ 0.53
RLIMQ9NVW2 AC026185.1-201ENST00000445748 174 ntBASIC18.36■□□□□ 0.53
RLIMQ9NVW2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.36■□□□□ 0.53
RLIMQ9NVW2 AL031963.3-201ENST00000606441 850 ntBASIC18.36■□□□□ 0.53
RLIMQ9NVW2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RLIMQ9NVW2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 MIR663A-201ENST00000385250 93 ntBASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 CROCCP5-201ENST00000436658 830 ntBASIC18.35■□□□□ 0.53
RLIMQ9NVW2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 AC105036.2-201ENST00000569468 176 ntBASIC18.35■□□□□ 0.53
RLIMQ9NVW2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms