Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC092666.2-201ENST00000613287 246 ntBASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 AC092118.2-201ENST00000613495 667 ntBASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZCCHC3Q9NUD5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TSPY6P-201ENST00000448518 926 ntBASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TREX1-205ENST00000625293 1783 ntBASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZCCHC3Q9NUD5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 GUSBP6-202ENST00000438529 1198 ntBASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 AC007952.6-201ENST00000573168 2673 ntBASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 AC003957.1-201ENST00000625108 2673 ntBASIC18.54■□□□□ 0.56
ZCCHC3Q9NUD5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 AL390719.1-204ENST00000412397 1219 ntBASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 AC091874.3-201ENST00000512672 1195 ntBASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZCCHC3Q9NUD5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 AC116562.4-201ENST00000641316 2276 ntBASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZCCHC3Q9NUD5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms