Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 KRT18P6-201ENST00000555540 1265 ntBASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 AC008687.6-201ENST00000596318 630 ntBASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 AIRN-201ENST00000601203 4374 ntBASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN4Q9NRR5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 AL121906.2-201ENST00000621597 723 ntBASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN4Q9NRR5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 AC124283.5-201ENST00000624661 1809 ntBASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 TFP1-202ENST00000475455 1573 ntBASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN4Q9NRR5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
UBQLN4Q9NRR5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
UBQLN4Q9NRR5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms