Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.62■□□□□ 0.57
NEUROD4Q9HD90 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 BX276092.2-201ENST00000417668 665 ntBASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.61■□□□□ 0.57
NEUROD4Q9HD90 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 AC116562.4-201ENST00000641316 2276 ntBASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEUROD4Q9HD90 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 AC073210.2-201ENST00000430369 194 ntBASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms