Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KIAA1549Q9HCM3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 PRKY-204ENST00000533551 1019 ntBASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 BX088651.1-201ENST00000540551 451 ntBASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 AC073912.3-201ENST00000624414 853 ntBASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 KRT16P6-202ENST00000425692 1426 ntBASIC17.68■□□□□ 0.42
KIAA1549Q9HCM3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KIAA1549Q9HCM3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.66■□□□□ 0.42
KIAA1549Q9HCM3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
KIAA1549Q9HCM3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms