Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 KRT8P17-201ENST00000453110 1448 ntBASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COMMD4Q9H0A8 AP001271.2-201ENST00000624018 1556 ntBASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD4Q9H0A8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COMMD4Q9H0A8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
COMMD4Q9H0A8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.39■□□□□ 0.38
COMMD4Q9H0A8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD4Q9H0A8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms