Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM2Q9C040 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM2Q9C040 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM2Q9C040 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM2Q9C040 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TRIM2Q9C040 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 BX276092.2-201ENST00000417668 665 ntBASIC18.14■□□□□ 0.49
TRIM2Q9C040 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 AL138781.1-201ENST00000566567 1274 ntBASIC18.14■□□□□ 0.49
TRIM2Q9C040 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM2Q9C040 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM2Q9C040 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 AL158211.5-201ENST00000623583 2518 ntBASIC18.13■□□□□ 0.49
TRIM2Q9C040 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.13■□□□□ 0.49
TRIM2Q9C040 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 HCG11-201ENST00000411553 5696 ntBASIC18.13■□□□□ 0.49
TRIM2Q9C040 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM2Q9C040 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM2Q9C040 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 PHGDH-210ENST00000641115 1638 ntBASIC18.12■□□□□ 0.49
TRIM2Q9C040 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms