Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 TMPOP1-202ENST00000424642 1267 ntBASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 AC004980.1-204ENST00000429707 299 ntBASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 AC011506.1-201ENST00000474329 610 ntBASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC46A2Q9BY10 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 NAPSB-206ENST00000562112 1266 ntBASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 AC026271.3-201ENST00000571884 352 ntBASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 AC005363.2-201ENST00000618631 242 ntBASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 BX119927.1-201ENST00000636596 1552 ntBASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A2Q9BY10 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 B3GAT3P1-201ENST00000471720 806 ntBASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A2Q9BY10 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 AC131212.4-201ENST00000623606 975 ntBASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A2Q9BY10 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SLC46A2Q9BY10 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC46A2Q9BY10 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.39■□□□□ 0.86
SLC46A2Q9BY10 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 AC005521.1-201ENST00000393351 872 ntBASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 AC092865.7-201ENST00000641832 219 ntBASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SLC46A2Q9BY10 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 AC020907.5-201ENST00000624372 1936 ntBASIC20.38■□□□□ 0.85
SLC46A2Q9BY10 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms