Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 MIR572-201ENST00000384983 95 ntBASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 AL138781.2-201ENST00000617896 1843 ntBASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SSBP4Q9BWG4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 KRT16P2-201ENST00000414673 1423 ntBASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 AL136162.1-201ENST00000607711 1078 ntBASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP4Q9BWG4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 AL136116.3-201ENST00000402907 1138 ntBASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 AC008764.7-201ENST00000593779 1081 ntBASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 AC135279.3-201ENST00000610945 1311 ntBASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 AC116050.2-201ENST00000612102 1779 ntBASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP4Q9BWG4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 LINC01465-201ENST00000408887 1940 ntBASIC14.84□□□□□ -0.03
SSBP4Q9BWG4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms