Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP4Q99569 AC116351.2-201ENST00000606540 1585 ntBASIC19.24■□□□□ 0.67
PKP4Q99569 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PKP4Q99569 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 CD99P1-205ENST00000527459 561 ntBASIC19.24■□□□□ 0.67
PKP4Q99569 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP4Q99569 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.24■□□□□ 0.67
PKP4Q99569 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PKP4Q99569 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP4Q99569 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP4Q99569 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP4Q99569 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP4Q99569 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP4Q99569 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PKP4Q99569 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PKP4Q99569 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PKP4Q99569 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP4Q99569 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP4Q99569 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP4Q99569 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP4Q99569 AP003097.1-201ENST00000530657 1135 ntBASIC19.23■□□□□ 0.67
PKP4Q99569 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.23■□□□□ 0.67
PKP4Q99569 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.23■□□□□ 0.67
PKP4Q99569 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.23■□□□□ 0.67
PKP4Q99569 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP4Q99569 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP4Q99569 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PKP4Q99569 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.22■□□□□ 0.67
PKP4Q99569 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.22■□□□□ 0.67
PKP4Q99569 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.22■□□□□ 0.67
PKP4Q99569 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PKP4Q99569 AC026366.1-201ENST00000488803 879 ntBASIC19.22■□□□□ 0.67
PKP4Q99569 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.22■□□□□ 0.67
PKP4Q99569 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 AC125437.2-201ENST00000625180 2167 ntBASIC19.22■□□□□ 0.67
PKP4Q99569 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP4Q99569 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.21■□□□□ 0.67
PKP4Q99569 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PKP4Q99569 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 POM121L13P-201ENST00000422362 380 ntBASIC19.21■□□□□ 0.67
PKP4Q99569 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.21■□□□□ 0.67
PKP4Q99569 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 TFP1-202ENST00000475455 1573 ntBASIC19.21■□□□□ 0.67
PKP4Q99569 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.21■□□□□ 0.67
PKP4Q99569 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.21■□□□□ 0.67
PKP4Q99569 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PKP4Q99569 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PKP4Q99569 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PKP4Q99569 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP4Q99569 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PKP4Q99569 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.2■□□□□ 0.66
PKP4Q99569 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PKP4Q99569 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP4Q99569 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.2■□□□□ 0.66
PKP4Q99569 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PKP4Q99569 ESRRAP1-201ENST00000400596 1257 ntBASIC19.2■□□□□ 0.66
PKP4Q99569 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms