Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCC1Q96S66 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLCC1Q96S66 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CLCC1Q96S66 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCC1Q96S66 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLCC1Q96S66 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.58■□□□□ 0.25
CLCC1Q96S66 LTB4R2-202ENST00000528054 3092 ntBASIC16.58■□□□□ 0.24
CLCC1Q96S66 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCC1Q96S66 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCC1Q96S66 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.58■□□□□ 0.24
CLCC1Q96S66 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCC1Q96S66 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCC1Q96S66 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CLCC1Q96S66 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCC1Q96S66 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AC245052.3-201ENST00000450182 901 ntBASIC16.57■□□□□ 0.24
CLCC1Q96S66 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 KRT18P61-201ENST00000585825 1298 ntBASIC16.57■□□□□ 0.24
CLCC1Q96S66 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCC1Q96S66 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCC1Q96S66 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 AC112907.3-201ENST00000577781 2400 ntBASIC16.56■□□□□ 0.24
CLCC1Q96S66 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCC1Q96S66 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCC1Q96S66 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCC1Q96S66 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCC1Q96S66 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCC1Q96S66 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCC1Q96S66 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCC1Q96S66 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCC1Q96S66 KRT16P2-201ENST00000414673 1423 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms