Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AC135050.7-201ENST00000624508 2218 ntBASIC16.85■□□□□ 0.29
CITED4Q96RK1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AL031432.3-201ENST00000607698 485 ntBASIC16.85■□□□□ 0.29
CITED4Q96RK1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AC068880.1-201ENST00000507289 2297 ntBASIC16.85■□□□□ 0.29
CITED4Q96RK1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CITED4Q96RK1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 AC124067.4-201ENST00000519691 2379 ntBASIC16.85■□□□□ 0.29
CITED4Q96RK1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CITED4Q96RK1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AC009113.1-201ENST00000570267 2443 ntBASIC16.84■□□□□ 0.29
CITED4Q96RK1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 AL355001.2-201ENST00000620617 1191 ntBASIC16.84■□□□□ 0.29
CITED4Q96RK1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.84■□□□□ 0.29
CITED4Q96RK1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CITED4Q96RK1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.29
CITED4Q96RK1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CITED4Q96RK1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CITED4Q96RK1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
CITED4Q96RK1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.83■□□□□ 0.28
CITED4Q96RK1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.83■□□□□ 0.28
CITED4Q96RK1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.83■□□□□ 0.28
CITED4Q96RK1 SRD5A1P1-201ENST00000442297 786 ntBASIC16.83■□□□□ 0.28
CITED4Q96RK1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.83■□□□□ 0.28
CITED4Q96RK1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CITED4Q96RK1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms