Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2AAQ96QV6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2AAQ96QV6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.12■□□□□ 0.33
HIST1H2AAQ96QV6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 AC120498.9-201ENST00000339021 3867 ntBASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 KRT17P1-201ENST00000399211 1546 ntBASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H2AAQ96QV6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 AC007952.6-201ENST00000573168 2673 ntBASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 AC003957.1-201ENST00000625108 2673 ntBASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 BX276092.2-201ENST00000417668 665 ntBASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H2AAQ96QV6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 AL121832.2-201ENST00000610979 668 ntBASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 TMEM179-206ENST00000616017 1645 ntBASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 HTR7P1-202ENST00000624664 4411 ntBASIC17.09■□□□□ 0.33
HIST1H2AAQ96QV6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HIST1H2AAQ96QV6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H2AAQ96QV6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms