Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 AC099791.2-201ENST00000605725 427 ntBASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IPQ96QF0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IPQ96QF0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 AC239859.2-201ENST00000444165 318 ntBASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 AL035685.1-201ENST00000636663 812 ntBASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IPQ96QF0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 AC009237.3-201ENST00000393279 1427 ntBASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 AC009237.14-201ENST00000609975 1594 ntBASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IPQ96QF0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms