Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.38■□□□□ 0.85
RPRD1AQ96P16 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AC112907.3-201ENST00000577781 2400 ntBASIC20.37■□□□□ 0.85
RPRD1AQ96P16 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 AC110285.5-201ENST00000611501 352 ntBASIC20.37■□□□□ 0.85
RPRD1AQ96P16 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 TFP1-202ENST00000475455 1573 ntBASIC20.37■□□□□ 0.85
RPRD1AQ96P16 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.37■□□□□ 0.85
RPRD1AQ96P16 NBPF21P-201ENST00000425093 1451 ntBASIC20.37■□□□□ 0.85
RPRD1AQ96P16 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPRD1AQ96P16 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 UBE2SP1-201ENST00000450587 669 ntBASIC20.36■□□□□ 0.85
RPRD1AQ96P16 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPRD1AQ96P16 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 AP006587.1-201ENST00000534129 1502 ntBASIC20.35■□□□□ 0.85
RPRD1AQ96P16 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPRD1AQ96P16 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms